Chromatin state at chromosome 10q24

Gilchrist, James J.; Auckland, Kathryn; Parks, Tom; Mentzer, Alexander J.; Goldblatt, Lily; Naranbhai, Vivek; Band, Gavin; Rockett, Kirk A.; Toure, Ousmane B.; Konate, Salimata; Sissoko, Sibiri; Djimdé, Abdoulaye A.; Thera, Mahamadou A.; Doumbo, Ogobara K.; Sow, Samba; Floyd, Sian; Pönnighaus, Jörg M.; Warndorff, David K.; Crampin, Amelia C.; Fine, Paul E. M.; Fairfax, Benjamin P.; Hill, Adrian V. S.

Chromatin state at chromosome 10q24

Gilchrist, JJ; Auckland, K; Parks, T; Mentzer, AJ; Goldblatt, L; Naranbhai, V; Band, G; Rockett, KA; Toure, OB; Konate, S; Sissoko, S; Djimdé, AA; Thera, MA; Doumbo, OK; Sow, S; Floyd, S

; Pönnighaus, JM; Warndorff, DK; Crampin, AC

; Fine, PEM; Fairfax, BP and Hill, AVS (2022). Chromatin state at chromosome 10q24. [Dataset]. PLOS Pathogens. https://doi.org/10.1371/journal.ppat.1010312.s020

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Chromatin state segmentation data (http://genome.ucsc.edu/cgi-bin/hgFileUi?db=hg19&g=wgEncodeBroadHmm) across 9 cell types (H1 ES, embryonic stem cells; K562, erythrocytic leukemia cells; GM12878, B-lymphoblastoid cells; HepG2, hepatocellular carcinoma cells; HUVEC, umbilical vein endothelial cells; HSMM, skeletal muscle myoblasts; NHLF, normal lung fibroblasts, NHEK, normal epidermal keratinocytes; HMEC, mammary epithelial cells) at 33 99%credible set SNPs for the leprosy association at chromosome 10q24.

Keywords

Leprosy; Genetic loci; Single nucleotide polymorphisms; Gene expression

Item Type	Dataset
Resource Type	Resource Type Resource Description Dataset Quantitative
Capture method	Experiment
Date	19 September 2022
Language(s) of written materials	English
Creator(s)	Gilchrist, JJ; Auckland, K; Parks, T; Mentzer, AJ; Goldblatt, L; Naranbhai, V; Band, G; Rockett, KA; Toure, OB; Konate, S; Sissoko, S; Djimdé, AA; Thera, MA; Doumbo, OK; Sow, S; Floyd, S ; Pönnighaus, JM; Warndorff, DK; Crampin, AC ; Fine, PEM; Fairfax, BP and Hill, AVS
LSHTM Faculty/Department	Faculty of Epidemiology and Population Health > Dept of Infectious Disease Epidemiology (-2023)
Participating Institutions	London School of Hygiene & Tropical Medicine, London, United Kingdom
Date Deposited	27 Mar 2023 09:42
Last Modified	18 Sep 2025 15:01
Publisher	PLOS Pathogens