Data Creators(s) Item Type No Grouping

Nutritional Status and Tuberculosis Risk in Adult and Pediatric Household Contacts. (2016) Aibana, Omowunmi; Acharya, Xeno; Huang, Chuan-Chin; Becerra, Mercedes C.; Galea, Jerome T.; Chiang, Silvia S.; Contreras, Carmen; Calderon, Roger; Yataco, Rosa; Velásquez, Gustavo E.; Tintaya, Karen; Jimenez, Judith; Lecca, Leonid; Murray, Megan B. description

PhyloTrack. (2015) Benavente, Ernest; Coll, Francesc; Furnham, Nick; Mcnerney, Ruth; Glynn, Judith; Campino, Susana; Pain, Arnab; Mohareb, Fady R; Clark, Taane

Transcriptome data for bacterial and fungal keratitis compared to cadaver cornea. (2014) Chidambaram, Jaya D.; Bauer, Julien; Holland, Martin; Burton, Matthew; Prajna, Namperumalsamy V; Srikanthi, Palepu; Lalitha, Prajna; Elakkiya, Shanmugam; Lanjewar, Shruti

Comparison of M. tuberculosis and M. bovis BCG in diluted whole blood cultures. (2015) Cliff, Jackie; Cho, Jang-Eun; Lee, Ji-Sook; Ronacher, Katharina; King, Elizabeth; van Helden, Paul; Walzl, Gerhard; Dockrell, Hazel

Excessive Cytolytic Responses Predict Tuberculosis Relapse After Apparently Successful Treatment. (2015) Cliff, Jackie; Cho, Jang-Eun; Lee, Ji-Sook; Ronacher, Katharina; King, Elizabeth; van Helden, Paul; Walzl, Gerhard; Dockrell, Hazel

Tuberculosis Patients Blood Gene Expression Through Treatment. (2012) Cliff, Jackie; Lee, Ji-Sook; Constantinou, Nicholas; Cho, Jang-Eun; Clark, Taane G.; Ronacher, Katharina; King, Elizabeth C.; Lukey, Pauline T.; Duncan, Ken; Van Helden, Paul D.; Walzl, Gerhard; Dockrell, Hazel M.

Tuberculosis Patients Blood Gene Expression Through Treatment (cured and end-of-treatment patients). (2012) Cliff, Jackie; Lee, Ji-Sook; Constantinou, Nicholas; Cho, Jang-Eun; Clark, Taane G.; Ronacher, Katharina; King, Elizabeth C.; Lukey, Pauline T.; Duncan, Ken; Van Helden, Paul D.; Walzl, Gerhard; Dockrell, Hazel M.

In Silico Spoligotyping. (2012) Coll, Francesc; Mallard, K; Preston, MD; Bentley, S; Parkhill, Julian; Mcnerney, Ruth; Martin, N; Clark, Taane

TB Profiler. (2015) Coll, Francesc; Mcnerney, Ruth; Preston, Mark D.; Guerra-assunção, José Afonso; Warry, Andrew; Hill-Cawthorne, Grant; Mallard, Kim; Nair, Mridul; Miranda, Anabela; Alves, Adriana; Perdigão, João; Viveiros, Miguel; Portugal, Isabel; Hasan, Zahra; Hasan, Rumina; Glynn, Judith; Martin, Nigel; Pain, Arnab; Clark, Taane folder_zip

PolyTB: A web-based resource designed to explore Mycobacterium tuberculosis complex (MTBC) genomic variation at a global scale. (2014) Coll, Francesc; Preston, Mark; Guerra-Assunção, José Afonso; Hill-Cawthorn, Grant; Harris, David; Perdigão, João; Viveiros, Miguel; Portugal, Isabel; Drobniewski, Francis; Gagneux, Sebastien; Glynn, Judith R.; Pain, Arnab; Parkhill, Julian; McNerney, Ruth; Martin, Nigel; Clark, Taane

Age- and Sex-Specific Social Contact Patterns and Incidence of Mycobacterium tuberculosis Infection: Interview Questionnaire. (2015) Dodd, Peter J; Looker, Clare; Plumb, Ian D.; Bond, Virginia; Schaap, Ab; Shanaube, Kwame; Muyoyeta, Monde; Vynnycky, Emilia; Godfrey-faussett, Peter; Corbett, Elizabeth; Beyers, Nulda; Ayles, Helen; White, Richard

Data from: Transmission of multidrug-resistant and drug-susceptible tuberculosis within households: a prospective cohort study. (2015) Grandjean, Louis; Gilman, Robert H.; Martin, Laura; Soto, Esther; Castro, Beatriz; Lopez, Sonia; Coronel, Jorge; Castillo, Edith; Alarcon, Valentina; Lopez, Virginia; San Miguel, Angela; Quispe, Neyda; Asencios, Luis; Dye, Christopher; Moore, David grid_on

Diagnostic Accuracy of Lateral Flow Urine LAM Assay for TB Screening of Adults with Advanced Immunosuppression Attending Routine HIV Care in South Africa. (2016) Hanifa, Yasmeen; Fielding, Katherine; Chihota, Violet N.; Adonis, Lungiswa; Charalambous, Salome; Karstaedt, Alan; McCarthy, Kerrigan; Nicol, Mark P.; Ndlovu, Nontobeko T.; Sahid, Faieza; Churchyard, Gavin; Grant, Alison D.

Data for: "The utility of repeat Xpert MTB/RIF testing to diagnose tuberculosis in HIV-positive adults with initial negative result". (2016) Hanifa, Yasmeen; Fielding, Katherine; Grant, Alison D.; Churchyard, Gavin J.

Comparing research investment to United Kingdom institutions and published outputs for tuberculosis, HIV and malaria: a systematic analysis across 1997–2013. (2015) Head, Michael Gavin; Fitchett, Joseph; Derrick, Gemma; Wurie, Fatima B; Meldrum, Jonathan; Kumari, Nina; Beattie, Benjamin; Counts, Christopher J; Atun, Rifat grid_on

A Bayesian approach to understanding gender differences in tuberculosis disease burden. (2018) Horton, Katherine C; Sumner, Tom; Houben, Rein M G J; Corbett, Elizabeth L; White, Richard G

Financial barriers and coping strategies: a qualitative study of accessing multidrug-resistant tuberculosis and tuberculosis care in Yunnan, China. (2017) Hutchison, Coll; Khan, Mishal; Yoong, J.; Coker, Richard description

Autopsy Prevalence of Tuberculosis and Other Potentially Treatable Infections among Adults with Advanced HIV Enrolled in Out-Patient Care in South Africa: Lesedi Kamoso study data. (2016) Karat, Aaron S.; Omar, Tanvier; von Gottberg, Anne; Tlali, Mpho; Chihota, Violet N.; Churchyard, Gavin J.; Fielding, Katherine L.; Johnson, Suzanne; Martinson, Neil A.; McCarthy, Kerrigan; Wolter, Nicole; Wong, Emily B.; Charalambous, Salome; Grant, Alison D.

Measuring mortality due to HIV-associated tuberculosis among adults in South Africa: comparing verbal autopsy, minimally-invasive autopsy, and research data. Data from the Lesedi Kamoso study. (2016) Karat, Aaron; Tlali, Mpho; Fielding, Katherine; Charalambous, Salome; Chihota, Violet N.; Churchyard, Gavin J.; Hanifa, Yasmeen; Johnson, Suzanne; McCarthy, Kerrigan; Martinson, Neil A.; Omar, Tanvier; Kahn, Kathleen; Chandramohan, Daniel; Grant, Alison D. grid_on

Code for "The relative fitness of drug resistant Mycobacterium tuberculosis: a modelling study of household transmission in Lima, Peru". (2018) Knight, Gwen

Factors associated with tuberculosis infection, and with anti-mycobacterial immune responses, among five year olds BCG-immunised at birth in Entebbe, Uganda. (2014) Lule, Swaib Abubaker; Mawa, Patrice; Nkurunungi, Gyaviira; Nampijja, Margaret; Kizito, Dennison; Akello, Florence; Muhangi, Lawrence; Elliott, Alison; Webb, Emily L

Empiric tuberculosis treatment in South African primary health care facilities - for whom, where, when and why: Implications for the development of tuberculosis diagnostic tests. (2018) McCarthy, Kerrigan; Fielding, Katherine; Churchyard, Gavin J.; Grant, Alison D.

Model code for "An explanation for the low proportion of tuberculosis that results from transmission between household and known social contacts". (2017) Mccreesh, Nicky description

LAMP minimal dataset. (2016) Nliwasa, Marriott; MacPherson, Peter; Chisala, Palesa; Kamdolozi, Mercy; Khundi, Mcewen Joseph; Kaswaswa, Kruger; Mwapasa, Mphatso; Msefula, Chisomo; Sohn, Hojoon; Flach, Clare; Corbett, Elizabeth description

Evidence for Host-Bacterial Co-evolution via Genome Sequence Analysis of 480 Thai Mycobacterium tuberculosis Lineage 1 Isolates. (2018) Palittapongarnpim, Prasit; Ajawatanawong, Pravech; Viratyosin, Wasna; Smittipat, Nat; Disratthakit, Areeya; Mahasirimongkol, Surakameth; Yanai, Hideki; Yamada, Norio; Nedsuwan, Supalert; Imasanguan, Worarat; Kantipong, Pacharee; Chaiyasirinroje, Boonchai; Wongyai, Jiraporn; Toyo-oka, Licht; Phelan, Jody; Parkhill, Julian; Clark, Taane G.; Hibberd, Martin L.; Ruengchai, Wuthiwat; Palittapongarnpim, Panawun; Juthayothin, Tada; Tongsima, Sissades; Tokunaga, Katsushi

Whole genome sequences for M.tuberculosis isolates from the TDR strain bank. (2015) Phelan, Jody; Coll, Francesc; Mcnerney, Ruth; Ascher, David B.; Pires, Douglas E. V.; Furnham, Nick; Coeck, Nele; Hill-Cawthorne, Grant A.; Nair, Mridul B.; Mallard, Kim; Ramsay, Andrew; Campino, Susana; Hibberd, Martin; Pain, Arnab; Rigouts, Leen; Clark, Taane description

Data from: Dynamics of cough frequency in adults undergoing treatment for pulmonary tuberculosis. (2017) Proaño, Alvaro; Bravard, Marjory A.; López, José W.; Lee, Gwenyth O.; Bui, David; Datta, Sumona; Comina, Germán; Zimic, Mirko; Coronel, Jorge; Caviedes, Luz; Cabrera, José L.; Salas, Antonio; Ticona, Eduardo; Vu, Nancy M.; Kirwan, Daniela E.; Loader, Maria-Cristina I.; Friedland, Jon S.; Moore, David A. J.; Evans, Carlton A.; Tracey, Brian H.; Gilman, Robert H.

Additional file 1: of Identifying mixed Mycobacterium tuberculosis infections from whole genome sequence data. (2018) Sobkowiak, Benjamin; Glynn, Judith R.; Houben, Rein M. G. J.; Mallard, Kim; Phelan, Jody E.; Guerra-Assunção, José Afonso; Banda, Louis; Mzembe, Themba; Viveiros, Miguel; McNerney, Ruth; Parkhill, Julian; Crampin, Amelia C.; Clark, Taane G.

Is There a Need for Viral Load Testing to Assess Treatment Failure in HIV-Infected Patients Who Are about to Change to Tenofovir-Based First-Line Antiretroviral Therapy? Programmatic Findings from Myanmar. (2016) Thiha, Nay; Chinnakali, Palanivel; Harries, Anthony D.; Shwe, Myint; Balathandan, Thanumalaya Perumal; Thein Than Tun, Sai; Das, Mrinalini; Tin, Htay Htay; Yi, Yi; Babin, François Xavier; Lwin, Thi Thi; Clevenbergh, Philippe Albert grid_on

Host Immune Responses Differ between M. africanum- and M. tuberculosis-Infected Patients following Standard Anti-tuberculosis Treatment. (2016) Tientcheu, Leopold; Haks, Mariëlle C.; Agbla, Schadrac; Sutherland, Jayne S.; Adetifa, Ifedayo; Donkor, Simon; Quinten, Edwin; Daramy, Mohammed; Antonio, Martin; Kampmann, Beate; Ottenhoff, Tom H. M.; Dockrell, Hazel; Ota, Martin O. description

Household HIV Testing Uptake among Contacts of TB Patients in South Africa. (2016) Velen, Kavindhran; Lewis, James J; Charalambous, Salome; Page-Shipp, Liesl; Popane, Flora; Churchyard, Gavin J.; Hoffmann, Christopher J. description

Casual and close contact data for buildings in South Africa and Zambia. (2011) White, Richard; Dodd, Peter description